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The search field accepts scientific plant names, i. e. names of genera or Brassicaceae tribes.

Examples:

  • Camelineae — will find information about all member genera of tribe Camelineae.
  • Arabidopsis — will find information about the genus Arabidopsis.

After having typed 3 characters, you'll be provided with suggestions from the database.

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  • Phylogenetics references
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    We store the sequence data you submit for analysis on our system and any analysis results are also stored temporarily. This is quite obviously technically necessary to provide the service available on this page.

    Sequence data can not be connected to any personal data of yours other than the technically necessary session cookie stored on your computer (see Privacy policy at the end of this page).

    Your sequence data and analysis results are stored for a maximum of one day. After this period of time they are automatically deleted. By using this service you implicitely accept these terms.

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Export tribe tree in format...

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Scalable Vector Graphics: a graphics format suitable for import into many graphics programs e. g. Adobe, Corel, Inkscape...
"Comma-separated values": a data format suitable for import into most spreadsheet and database programs. The column separator used here is the semicolon. Character coding is UTF-8.
A format commonly used in phylogenetics to represent a tree structure as nested brackets.
"American standard code for information interchange": the name can be used almost synonymously with "plain text", also including a very limited graphics capability.
A format commonly used to store alignments along with meta-information, e. g. analysis parameters. Used e. g. by PAUP* and MrBayes.
Probably due to its simplicity the most frequently used sequence or alignment format ever designed. Used by a vast majority of bioinformatics programs and packages.
Widely used alignment format. Required as input by many bioinformatics programs. The interleaved version is exported here. Unfortunately very limited meta-information capabilities.
The alignment format originally used by the GCG Wisconsin bioinformatics package (e. g. Pileup). Still widely used as an alignment format.
The format used by Clustal (and some other programs) to store alignments.
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Species Checklist v1.3

Heidelberg University >  COS Heidelberg >  Biodiversity and Plant Systematics >  BrassiBase

Reference tree for tribe Aphragmeae

SVG Tree

Aphragmus eschscholtzianus0.02197274019375018000Aphragmus nepalensis0.019175254646888341000.03295703798761503300Aphragmus oxycarpus0.00953406532395752010Aphragmus involucratus0.010764544518000100000.076805040879431824000.01665308676574583900Aphragmus obscurus0.03903378997939178900Aphragmus ohbanus0.00446847724949756170Aphragmus hobsonii0.000000837044488461620.00430212762825342350Aphragmus serpens0.009018720575833697600.040532560192669757000.037321570468416845000.000.0250.050.0750.1substitutions/site

/var/www/brassibase/ / https://brassibase.cos.uni-heidelberg.de DE N