Search
Reset Examples

The search field accepts scientific plant names, i. e. names of genera or Brassicaceae tribes.

Examples:

  • Camelineae — will find information about all member genera of tribe Camelineae.
  • Arabidopsis — will find information about the genus Arabidopsis.

After having typed 3 characters, you'll be provided with suggestions from the database.

Links
  • Phylogenetics references
  • Privacy policy in respect to your sequence data

    We store the sequence data you submit for analysis on our system and any analysis results are also stored temporarily. This is quite obviously technically necessary to provide the service available on this page.

    Sequence data can not be connected to any personal data of yours other than the technically necessary session cookie stored on your computer (see Privacy policy at the end of this page).

    Your sequence data and analysis results are stored for a maximum of one day. After this period of time they are automatically deleted. By using this service you implicitely accept these terms.

Export options

Export tribe tree in format...

Newick
ASCII
SVG
as
Browser view
Download
Scalable Vector Graphics: a graphics format suitable for import into many graphics programs e. g. Adobe, Corel, Inkscape...
"Comma-separated values": a data format suitable for import into most spreadsheet and database programs. The column separator used here is the semicolon. Character coding is UTF-8.
A format commonly used in phylogenetics to represent a tree structure as nested brackets.
"American standard code for information interchange": the name can be used almost synonymously with "plain text", also including a very limited graphics capability.
A format commonly used to store alignments along with meta-information, e. g. analysis parameters. Used e. g. by PAUP* and MrBayes.
Probably due to its simplicity the most frequently used sequence or alignment format ever designed. Used by a vast majority of bioinformatics programs and packages.
Widely used alignment format. Required as input by many bioinformatics programs. The interleaved version is exported here. Unfortunately very limited meta-information capabilities.
The alignment format originally used by the GCG Wisconsin bioinformatics package (e. g. Pileup). Still widely used as an alignment format.
The format used by Clustal (and some other programs) to store alignments.
Downloads

Species Checklist v1.3

Reference tree for tribe Smelowskieae

SVG Tree

Smelowskia media0.00539840120188046779Smelowskia alba0.02179321174270509864Smelowskia porsildii0.008059254035238471930.00000097387627302186Smelowskia calycina0.00292826248932510219Smelowskia bifurcata0.002645282758568633790.01639582079085567107Smelowskia bartholomewii0.01698742169730802984Smelowskia tibetica0.019658786788980069790.01488453843485950008Smelowskia altaica0.00000097387627302186Smelowskia czukotica0.002907506750065557650.00871167585823047312Smelowskia sophiifolia0.006203948034313861580.021629166874957316690.00539038821901892395Smelowskia pyriformis0.01113376918544001053Smelowskia johnsonii0.008201569083911142490.00000097387627302186Smelowskia ovalis0.011094492206369308000.00273738708586233372Smelowskia parryoides0.00546179902632708703Smelowskia inopinata0.019449856860116316450.000000973876273021860.00247263460284280782Smelowskia jacutica0.019718750105151811040.008077230222691264210.003325001520837596310.002701987335163223010.00270257437804563355Smelowskia borealis0.000000973876273021860.000000973876273021860.00247876764793248218Smelowskia americana0.011209320181144639270.00497876913669659943Smelowskia sisymbrioides0.00249414202807290162Smelowskia annua0.008326289874874111260.05131376737628527696Smelowskia flavissima0.058972033599832912600.011350452482470138950.000.010.020.030.040.050.060.07substitutions/site

ASCII tree

           /------+ Smelowskia media
           |
           |  /----------------------------+ Smelowskia alba
           |  /
           |  \----------+ Smelowskia porsildii
           |  |
           |  |                        /---+ Smelowskia calycina
           |  |   /--------------------+
           /--+   |                    \---+ Smelowskia bifurcata
           |  |   |
        /--|  |   |                              /---------------------+ Smelowskia bartholomewii
        |  |  |   |          /-------------------+
        |  |  |   |          |                   \-------------------------+ Smelowskia tibetica
        |  |  |   |          |
        |  |  \---+   /------+                                       / Smelowskia altaica
        |  |      |   |      |                            /----------+
        |  |      |   |      \----------------------------+          \---+ Smelowskia czukotica
        |  |      |   |                                   |
        |  |      |   |                                   \-------+ Smelowskia sophiifolia
        |  |      |   |
        |  \      |   |                 /-------------+ Smelowskia pyriformis
        |  |      \---+                 /
 /------+  |          |             /---\---------+ Smelowskia johnsonii
 |      |  |          |             |   |
 |      |  |          |             |   \-------------+ Smelowskia ovalis
 |      |  |          |          /--+
 |      |  |          |          |  /------+ Smelowskia parryoides
 |      |  |          \----------+  \
 |      |  |                     |  \-------------------------+ Smelowskia inopinata
 |      |  |                     |
=/      |  |                     \-------------------------+ Smelowskia jacutica
 |      |  |
 |      |  \ Smelowskia borealis
 |      |
 |      \-------------+ Smelowskia americana
 |
 |                                                                                 /--+ Smelowskia sisymbrioides
 |              /------------------------------------------------------------------+
 \--------------+                                                                  \----------+ Smelowskia annua
                |
                \----------------------------------------------------------------------------+ Smelowskia flavissima

 |------------|------------|------------|------------|-------------|------------|------------|-
 0         0.01         0.02         0.03         0.04          0.05         0.06         0.07
 substitutions/site

Bootstrapped tree

Out brassica-napus0.17498989010588955617Smelowskia media0.00539840120188046779Smelowskia alba0.02179321174270509864Smelowskia porsildii0.00805925403523847193230.00000097387627302186Smelowskia calycina0.00292826248932510219Smelowskia bifurcata0.00264528275856863379940.01639582079085567107Smelowskia bartholomewii0.01698742169730802984Smelowskia tibetica0.01965878678898006979790.01488453843485950008Smelowskia altaica0.00000097387627302186Smelowskia czukotica0.00290750675006555765980.00871167585823047312Smelowskia sophiifolia0.00620394803431386158980.02162916687495731669270.00539038821901892395Smelowskia pyriformis0.01113376918544001053Smelowskia johnsonii0.00820156908391114249390.00000097387627302186Smelowskia ovalis0.01109449220636930800530.00273738708586233372Smelowskia parryoides0.00546179902632708703Smelowskia inopinata0.01944985686011631645160.00000097387627302186250.00247263460284280782Smelowskia jacutica0.01971875010515181104710.00807723022269126421180.00332500152083759631100.00270198733516322301120.00270257437804563355Smelowskia borealis0.0000009738762730218650.00000097387627302186130.00247876764793248218Smelowskia americana0.01120932018114463927210.00497876913669659943Smelowskia sisymbrioides0.00249414202807290162Smelowskia annua0.008326289874874111261000.05131376737628527696Smelowskia flavissima0.05897203359983291260600.01135045248247013895830.117854300447522972180.20878773288358884463Out aethionema-grandiflorum0.2087877328835888446300.10.20.3substitutions/site

Family-wide context

AethionemeaeCardamineaeLepidieaeSmelowskia mediaSmelowskia albaSmelowskia porsildiiSmelowskia calycinaSmelowskia bifurcataSmelowskia bartholomewiiSmelowskia tibeticaSmelowskia altaicaSmelowskia czukoticaSmelowskia sophiifoliaSmelowskia pyriformisSmelowskia johnsoniiSmelowskia ovalisSmelowskia parryoidesSmelowskia inopinataSmelowskia jacuticaSmelowskia borealisSmelowskia americanaSmelowskia sisymbrioidesSmelowskia annuaSmelowskia flavissimaSmelowskieaeAlyssopsideaeBoechereaeCamelineaeCrucihimalayeaeDescurainieaeErysimeaeHalimolobeaeMalcolmieaeMicrolepidieaeOreophytoneaePhysarieaeTurritideaeYinshanieaeLineage IAlysseaeAnastaticeaeAphragmeaeArabideaeAsteaeBiscutelleaeCalepineaeCochlearieaeColuteocarpeaeConringieaeCremolobeaeEudemeaeHeliophileaeHillielleaeIberideaeKernereaeMegacarpaeeaeNotothlaspideaeSchizopetaleaeScoliaxoneaeStevenieaeBrassiceaeIsatideaeSisymbrieaeThelypodieaeLineage IIEutremeaeThlaspideaeExpanded lineage IIAnchonieaeBuniadeaeEuclidieaeHesperideaeChorisporeaeDontostemoneaeShehbazieaeLineage III

/var/www/brassibase/ / https://brassibase.cos.uni-heidelberg.de DE N