Search
Reset Examples

The search field accepts scientific plant names, i. e. names of genera or Brassicaceae tribes.

Examples:

  • Camelineae — will find information about all member genera of tribe Camelineae.
  • Arabidopsis — will find information about the genus Arabidopsis.

After having typed 3 characters, you'll be provided with suggestions from the database.

Links
  • Phylogenetics references
  • Privacy policy in respect to your sequence data

    We store the sequence data you submit for analysis on our system and any analysis results are also stored temporarily. This is quite obviously technically necessary to provide the service available on this page.

    Sequence data can not be connected to any personal data of yours other than the technically necessary session cookie stored on your computer (see Privacy policy at the end of this page).

    Your sequence data and analysis results are stored for a maximum of one day. After this period of time they are automatically deleted. By using this service you implicitely accept these terms.

Export options

Export tribe tree in format...

Newick
ASCII
SVG
as
Browser view
Download
Scalable Vector Graphics: a graphics format suitable for import into many graphics programs e. g. Adobe, Corel, Inkscape...
"Comma-separated values": a data format suitable for import into most spreadsheet and database programs. The column separator used here is the semicolon. Character coding is UTF-8.
A format commonly used in phylogenetics to represent a tree structure as nested brackets.
"American standard code for information interchange": the name can be used almost synonymously with "plain text", also including a very limited graphics capability.
A format commonly used to store alignments along with meta-information, e. g. analysis parameters. Used e. g. by PAUP* and MrBayes.
Probably due to its simplicity the most frequently used sequence or alignment format ever designed. Used by a vast majority of bioinformatics programs and packages.
Widely used alignment format. Required as input by many bioinformatics programs. The interleaved version is exported here. Unfortunately very limited meta-information capabilities.
The alignment format originally used by the GCG Wisconsin bioinformatics package (e. g. Pileup). Still widely used as an alignment format.
The format used by Clustal (and some other programs) to store alignments.
Downloads

Species Checklist v1.3

Reference tree for tribe Stevenieae

SVG Tree

Macropodium pterospermum0.01943075699160394200Macropodium nivale0.014734904704562296000.03437299499728460600Stevenia dahurica0.00194491183463722430Stevenia canescens0.00000130287192553528Stevenia tenuifolia0.007888521289412135700.001813650944417777900.08483077199021063500Stevenia alyssoides0.00415631717664686000Stevenia sergievskajae0.003531563449175429600.06938290827972680400Stevenia axillaris0.07427469289696604600Stevenia cheiranthoides subsp. incarnata0.00196479757940112380Stevenia cheiranthoides0.003698517593853012000.015406972336410968000.003336792779309636200.001610050872840734400.00536976806648216480Stevenia maximowiczii0.093770221137843210000.033864808832550448000.02927714107453043300Pseudoturritis turrita0.048948563762904150000.01322750419070986000Asperuginoides axillaris0.069444138015684290000.000.0250.050.0750.10.1250.150.175substitutions/site

ASCII tree

                                   /-------+ Macropodium pterospermum
                    /--------------+
                    |              \-----+ Macropodium nivale
                    |
                    |                                                     /+ Stevenia dahurica
                    |                                                     |
                    |                /------------------------------------+/ Stevenia canescens
                    |                |                                    \+
       /------------+                |                                     \--+ Stevenia tenuifolia
       |            |             /--+
       |            |             |  |                              /-+ Stevenia alyssoides
       |            |             |  /------------------------------+
       |            |             |  |                              \+ Stevenia sergievskajae
       |            |             |  \
       |            |             |  | /-------------------------------+ Stevenia axillaris
 /-----+            \-------------+  | |
 |     |                          |  \-+      / Stevenia cheiranthoides subsp. incarnata
 |     |                          |    \------+
 |     |                          |           \+ Stevenia cheiranthoides
=/     |                          |
 |     |                          \----------------------------------------+ Stevenia maximowiczii
 |     |
 |     \--------------------+ Pseudoturritis turrita
 |
 \-----------------------------+ Asperuginoides axillaris

 |----------|----------|----------|----------|----------|----------|---------|-
 0      0.025       0.05      0.075        0.1      0.125       0.15     0.175
 substitutions/site

Bootstrapped tree

Macropodium pterospermum0.01943075699160394200Macropodium nivale0.014734904704562296001000.03437299499728460600Stevenia dahurica0.00194491183463722430Stevenia canescens0.00000130287192553528Stevenia tenuifolia0.00788852128941213570800.001813650944417777901000.08483077199021063500Stevenia alyssoides0.00415631717664686000Stevenia sergievskajae0.003531563449175429601000.06938290827972680400Stevenia axillaris0.07427469289696604600Stevenia cheiranthoides subsp. incarnata0.00196479757940112380Stevenia cheiranthoides0.003698517593853012001000.01540697233641096800330.00333679277930963620210.00161005087284073440410.00536976806648216480Stevenia maximowiczii0.09377022113784321000980.03386480883255044800960.02927714107453043300Pseudoturritis turrita0.04894856376290415000550.01322750419070986000Asperuginoides axillaris0.06944413801568429000860.03866245878299207800Out brassica-napus0.105273689359847840000.11475262912478197000Out aethionema-grandiflorum0.1147526291247819700000.10.20.3substitutions/site

Family-wide context

AethionemeaeCardamineaeLepidieaeSmelowskieaeAlyssopsideaeBoechereaeCamelineaeCrucihimalayeaeDescurainieaeErysimeaeHalimolobeaeMalcolmieaeMicrolepidieaeOreophytoneaePhysarieaeTurritideaeYinshanieaeLineage IAlysseaeAnastaticeaeAphragmeaeArabideaeAsteaeBiscutelleaeCalepineaeCochlearieaeColuteocarpeaeConringieaeCremolobeaeEudemeaeHeliophileaeHillielleaeIberideaeKernereaeMegacarpaeeaeNotothlaspideaeSchizopetaleaeScoliaxoneaeMacropodium pterospermumMacropodium nivaleStevenia dahuricaStevenia canescensStevenia tenuifoliaStevenia alyssoidesStevenia sergievskajaeStevenia axillarisStevenia cheiranthoides subsp. incarnataStevenia cheiranthoidesStevenia maximowicziiPseudoturritis turritaAsperuginoides axillarisStevenieaeBrassiceaeIsatideaeSisymbrieaeThelypodieaeLineage IIEutremeaeThlaspideaeExpanded lineage IIAnchonieaeBuniadeaeEuclidieaeHesperideaeChorisporeaeDontostemoneaeShehbazieaeLineage III

/var/www/brassibase/ / https://brassibase.cos.uni-heidelberg.de DE N