This version of Internet Explorer is rather old. Several parts of this website will look odd in this browser.
Please consider upgrading to the most recent version.
Search
ResetExamples
The search field accepts scientific plant names, i. e. names of genera or Brassicaceae tribes.
Examples:
Camelineae — will find information about all member genera of tribe Camelineae.
Arabidopsis — will find information about the genus Arabidopsis.
After having typed 3 characters, you'll be provided with suggestions from the database.
Scalable Vector Graphics: a graphics format suitable for import into many graphics programs e. g. Adobe, Corel, Inkscape...
"Comma-separated values": a data format suitable for import into most spreadsheet and database programs. The column separator used here is the semicolon. Character coding is UTF-8.
A format commonly used in phylogenetics to represent a tree structure as nested brackets.
"American standard code for information interchange": the name can be used almost synonymously with "plain text", also including a very limited graphics capability.
A format commonly used to store alignments along with meta-information, e. g. analysis parameters. Used e. g. by PAUP* and MrBayes.
Probably due to its simplicity the most frequently used sequence or alignment format ever designed. Used by a vast majority of bioinformatics programs and packages.
Widely used alignment format. Required as input by many bioinformatics programs. The interleaved version is exported here. Unfortunately very limited meta-information capabilities.
The alignment format originally used by the GCG Wisconsin bioinformatics package (e. g. Pileup). Still widely used as an alignment format.
The format used by Clustal (and some other programs) to store alignments.
Jaén-Molina, J. Caujapé-Castells, J. A. Reyes-Betancort, H. Akhani, O. Fernández-Palacios, J. Pérez de Paz, R. Febles-Hernández, and A. Marrero-Rodríguez. 2009. The molecular phylogeny of Matthiola R. Br. (Brassicaceae) inferred from ITS sequences, with special emphasis on the Macaronesian endemics. Molec. Phylog. Evol. 53: 972–981. PDF A-70 Johnston, J. S. , A. E. Pepper, A. E. Hall, Z. J. Chen, G. Hodnett, J. Drabek, R. Lopez, and H. J. Price. 2005. Evolution of genome size in Brassicaceae. Ann. Bot. 95: 229–235.
Warwick, S. I. , C. Sauder, I. A. Al-Shehbaz, and F. Jacquemoud. 2007. Phylogenetic relationships in the tribes Anchonieae, Chorisporeae, Euclidieae, and Hesperideae (Brassicaceae) based on nuclear ribosomal ITS DNA sequences. Ann. Missouri Bot. Gard. 94: 56 - 78.